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There are several matches for 'Smf protein, DNA processing chain A'.
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67 matches
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organism
protein
1)
Flavobacteria bacterium BBFL7
EAS20603.1 -
Smf
protein
,
DNA
processing
chain
A.
[a.k.a. BBFL7_01491,
Smf protein, DNA processing chain A
, Q26HB3_FLABB]
2)
Nonlabens dokdonensis
DDD_1456 -
Smf
protein
,
DNA
processing
chain
A.
[a.k.a. AGC76583.1,
Smf protein, DNA processing chain A
, L7WCE6_NONDD]
3)
Pseudomonas alkylphenolica
dprA -
Smf
protein
,
DNA
processing
chain
A.
[a.k.a. PSAKL28_00570, AIL59295.1,
Smf protein, DNA processing chain A
]
4)
Pseudomonas sp. BAY1663
EXF44935.1 -
Smf
protein
,
DNA
processing
chain
A.
[a.k.a. BAY1663_02639,
Smf protein, DNA processing chain A
, EXF44935]
5)
Arcobacter nitrofigilis
ADG94490.1 -
SMF
family
protein
; COGs: COG0758 Rossmann fold nucleotide-binding
protein
involved in
DNA
uptake; InterPro IPR003488; KEGG: abu:Abu_0235
smf
protein
,
DNA
processing
chain
A; PFAM:
SMF
family
protein
; SPTR: A8ERD6
SMF
protein
,
DNA
processing
chain
A; PFAM:
DNA
recombination-mediator
protein
A; TIGRFAM:
DNA
protecting
protein
DprA.
[a.k.a. Arnit_2842, SMF family protein, WP_013136635.1]
6)
Marivirga tractuosa
ADR22883.1 -
DNA
protecting
protein
DprA; COGs: COG0758 Rossmann fold nucleotide-binding
protein
involved in
DNA
uptake; InterPro IPR003488; KEGG: chu:CHU_1444
DNA
processing
protein
; PFAM:
SMF
family
protein
; SPTR:
Smf
protein
DNA
processing
chain
A; TIGRFAM:
DNA
protecting
protein
DprA; PFAM:
DNA
recombination-mediator
protein
A; TIGRFAM:
DNA
protecting
protein
DprA.
[a.k.a. Ftrac_2907, E4TSU2, DNA protecting protein DprA]
7)
Meiothermus silvanus
ADH62946.1 -
DNA
protecting
protein
DprA; COGs: COG0758 Rossmann fold nucleotide-binding
protein
involved in
DNA
uptake; InterPro IPR003488; KEGG: ttj:TTHA0121 competence
protein
DprA (
smf
protein
(
DNA
processing
chain
A)); PFAM:
SMF
family
protein
; SPTR: C1XXH0
DNA
protecting
protein
DprA; TIGRFAM:
DNA
protecting
protein
DprA; PFAM:
DNA
recombination-mediator
protein
A; TIGRFAM:
DNA
protecting
protein
DprA.
[a.k.a. Mesil_1041, WP_013157527.1, DNA protecting protein DprA]
8)
Bacteroides coprosuis
Bcop_0445 -
DNA
protecting
protein
DprA; COGs: COG0758 Rossmann fold nucleotide-binding
protein
involved in
DNA
uptake; InterPro IPR003488; KEGG: bfr:BF4562
smf
protein
DNA
processing
chain
A; PFAM:
DNA
recombination-mediator
protein
A; SPTR: Putative
DNA
processing
Smf
-like
protein
; TIGRFAM:
DNA
recombination-mediator
protein
A; IMG reference gene:2504106109; PFAM:
DNA
recombination-mediator
protein
A; TIGRFAM:
DNA
protecting
protein
DprA.
[a.k.a. EGJ70663.1, NZ_CM001167.1, DNA protecting protein DprA]
9)
Hymenobacter roseosalivarius
SMB99130.1 -
DNA
protecting
protein
DprA; InterPro IPR003488; COGs: COG0758 Rossmann fold nucleotide-binding
protein
involved in
DNA
uptake; KEGG: ppd:Ppro_0529
DNA
protecting
protein
DprA; SPTR: A1ZYZ2
Smf
protein
DNA
processing
chain
A; PFAM:
SMF
family
protein
; TIGRFAM:
DNA
protecting
protein
DprA.
[a.k.a. SAMN00120144_0029, SMB99130, DNA protecting protein DprA]
10)
Isosphaera pallida
Isop_1820 -
DNA
protecting
protein
DprA; COGs: COG0758 Rossmann fold nucleotide-binding
protein
involved in
DNA
uptake; InterPro IPR003488; KEGG: psl:Psta_1070
DNA
protecting
protein
DprA; PFAM:
SMF
family
protein
; SPTR:
DNA
processing
chain
A; TIGRFAM:
DNA
protecting
protein
DprA; PFAM:
DNA
recombination-mediator
protein
A; TIGRFAM:
DNA
protecting
protein
DprA.
[a.k.a. ADV62402.1, ADV62402, WP_013564690.1]
11)
Mesorhizobium opportunistum
AEH88652.1 -
DNA
protecting
protein
DprA; COGs: COG0758 Rossmann fold nucleotide-binding
protein
involved in
DNA
uptake; InterPro IPR003488; KEGG: mlo:mlr0689
DNA
processing
chain
A; PFAM:
SMF
family
protein
; SPTR:
DNA
protecting
protein
DprA; TIGRFAM:
DNA
protecting
protein
DprA; PFAM:
DNA
recombination-mediator
protein
A; TIGRFAM:
DNA
protecting
protein
DprA.
[a.k.a. Mesop_4219, F7Y8B6_MESOW, DNA protecting protein DprA]
12)
Sulfurimonas autotrophica
Saut_1708 -
SMF
family
protein
; COGs: COG0758 Rossmann fold nucleotide-binding
protein
involved in
DNA
uptake; InterPro IPR003488; KEGG: abu:Abu_0235
smf
protein
,
DNA
processing
chain
A; PFAM:
SMF
family
protein
; SPTR: A3WIH9 Predicted Rossmann fold nucleotide-binding
protein
involved in
DNA
uptake; PFAM:
DNA
recombination-mediator
protein
A; TIGRFAM:
DNA
protecting
protein
DprA.
[a.k.a. ADN09752.1, SMF family protein, E0UPU3]
13)
Hippea maritima
AEA33821.1 -
DNA
protecting
protein
DprA; COGs: COG0758 Rossmann fold nucleotide-binding
protein
involved in
DNA
uptake; InterPro IPR003488; KEGG: pmx:PERMA_0241
protein
smf
(
DNA
-
processing
chain
A); PFAM:
DNA
recombination-mediator
protein
A; SPTR: Topoisomerase; TIGRFAM:
DNA
recombination-mediator
protein
A; PFAM:
DNA
recombination-mediator
protein
A; TIGRFAM:
DNA
protecting
protein
DprA.
[a.k.a. Hipma_0851, AEA33821, DNA protecting protein DprA]
14)
Azoarcus sp. BH72
drpA - Putative
DNA
processing
protein
DrpA (
Smf
protein
). Homology to drpA of H. influcenzae The
SMF
family (
DNA
processing
chain
A, dprA) are a group of bacterial
proteins
. In Helicobacter pylori, dprA is required for natural chromosomal and plasmid transformation InterPro:
SMF
family Tigerfam: dprA:
DNA
processing
protein
DprA,putative Pfam
SMF
family no signal peptide no TMHs; Family membership.
[a.k.a. azo0097, CAL92715.1, CAL92715]
15)
Proteiniborus sp. DW1
smf -
Protein
smf
;
DNA
-
processing
chain
A;,
DNA
recombination-mediator
protein
A,
DNA
recombination-mediator
protein
A, dnlj:
DNA
ligase, NAD-dependent; High confidence in function and specificity.
[a.k.a. DW1_1893, SCG83461.1, Protein smf DNA-processing chain A]
16)
Pseudoxanthomonas suwonensis 111
ADV26092.1 -
DNA
protecting
protein
DprA; KEGG: xal:XALc_2860 putative
dna
processing
chain
a
protein
; TIGRFAM:
DNA
protecting
protein
DprA; PFAM:
SMF
family
protein
.
[a.k.a. Psesu_0230, ADV26092, DNA protecting protein DprA]
17)
Pseudomonas putida W619
ACA70594.1 - TIGRFAM:
DNA
protecting
protein
DprA; PFAM:
SMF
family
protein
; KEGG: pen:PSEEN0026
smf
protein
,
DNA
processing
chain
A.
[a.k.a. PputW619_0088, B1J434_PSEPW, DNA protecting protein DprA]
18)
Mesorhizobium ciceri biovar
ADV13132.1 -
DNA
protecting
protein
DprA; KEGG: mlo:mlr0689
DNA
processing
chain
A; TIGRFAM:
DNA
protecting
protein
DprA; PFAM:
SMF
family
protein
.
[a.k.a. Mesci_4018, YP_004143182.1, 10119506]
19)
Campylobacter jejuni NCTC 11168
dprA -
DNA
processing
protein
A; Original (2000) note: Cj0634, unknown, len: 257 aa; similar, in part, to members of the
SMF
family e.g.
SMF
_HAEIN
SMF
protein
(
DNA
processing
chain
A) (373 aa),fasta scores; opt: 329 z-score: 487.6 E(): 7.2e-20, 31.5% identity in 213 aa overlap. 48.8% identity to HP0333; Updated (2006) note: Pfam domain PF02481
SMF
family identified within CDS. Further support given to product function. Literature search identified Campylobacter jejuni characterising paper. Product modified to more specific family member. Functional classification -
DNA
replication, restrictio [...]
[a.k.a. Cj0634, CAL34779.1, WP_002874287.1]
20)
Escherichia coli O157H7 Sakai
ECs4280 - Probable
DNA
processing
chain
A,similar to many
DNA
processing
chain
A (
Smf
protein
), e.g. [Neisseria meningitidis] gi|7378929|emb|CAB83472.1| percent identity 30 in 265 aa.
[a.k.a. BAB37703.1, gene:10367358, BAB37703]
67 matches
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